Combining DEVS simulation and ontological modeling for hierarchical analysis of the SARS-CoV-2 replication

Ali Ayadi, Claudia Frydman, Wissame Laddada, Isabelle Imbert, Cecilia Zanni-Merk, Lina Soualmia

SIMULATION: Transactions of The Society for Modeling and Simulation International (2023)10.1177/00375497231176085

The tip protein PAAR is required for the function of the type VI secretion system

Solène G Beauvois, Nicolas Flaugnatti, Marianne Ilbert, Marie Boyer, Esther Gavello-Fernandez, Rémi Fronzes, Dukas Jurėnas, Laure Journet

Microbiology Spectrum (2023)10.1128/spectrum.01478-23

Pseudomonas fluorescens MFE01 delivers a putative type VI secretion amidase that confers biocontrol against the soft‐rot pathogen Pectobacterium atrosepticum

Yvann Bourigault, Charly A Dupont, Jonas B Desjardins, Thierry Doan, Mathilde Bouteiller, Hugo Le Guenno, Sylvie Chevalier, Corinne Barbey, Xavier Latour, Eric Cascales, Annabelle Merieau

Environmental Microbiology (2023)10.1111/1462-2920.16492

Evaluation of the Efficiency of Random and Diblock Methacrylate-Based Amphiphilic Cationic Polymers against Major Bacterial Pathogens Associated with Cystic Fibrosis

Magali Casanova, Hamza Olleik, Slim Hdiouech, Clarisse Roblin, Jean-François Cavalier, Vanessa Point, Katy Jeannot, Baptiste Caron, Josette Perrier, Siméon Charriau, Mickael Lafond, Yohann Guillaneuf, Stéphane Canaan, Catherine Lefay, Marc Maresca

Antibiotics 12 (2023)10.3390/antibiotics12010120

Nanodiscs as a novel approach to resolve inter-protein energy transfer within the photosynthetic membrane of purple bacteria

Olivia Fiebig, Dihao Wang, Dvir Harris, Hila Toporik, Yi Ji, Chern Chuang, Muath Nairat, Ashley Tong, John Ogren, Stephanie Hart, Jianshu Cao, James N. Sturgis, Yuval Mazor, Gabriela Schlau-Cohen

Biophysical Journal 122:232a (2023)10.1016/j.bpj.2022.11.1368

Acinetobacter type VI secretion system comprises a non-canonical membrane complex

Ona Kandolo, Yassine Cherrak, Isaac Filella-Merce, Hugo Le Guenno, Artemis Kosta, Leon Espinosa, Pierre Santucci, Christophe Verthuy, Régine Lebrun, Michael Nilges, Riccardo Pellarin, Eric Durand

PLoS Pathogens 19:e1011687 (2023)10.1371/journal.ppat.1011687

Activity and Crystal Structure of the Adherent-Invasive Escherichia coli Tle3/Tli3 T6SS Effector/Immunity Complex Determined Using an AlphaFold2 Predicted Model

Thi Thu Hang Le, Christine Kellenberger, Marie Boyer, Pierre Santucci, Nicolas Flaugnatti, Eric Cascales, Alain Roussel, Stéphane Canaan, Laure Journet, Christian Cambillau

International Journal of Molecular Sciences 24:1740 (2023)10.3390/ijms24021740

The morphogenic protein CopD controls the spatio-temporal dynamics of PBP1a and PBP2b in Streptococcus pneumoniae

Cassandra Lenoir, Anaïs Pelletier, Sylvie Manuse, Hugo Millat, Adrien Ducret, Anne Galinier, Thierry Doan, Christophe Grangeasse

mBio (2023)10.1128/mbio.01411-23

A journey with type IX secretion system effectors: selection, transport, processing and activities

Maëlle Paillat, Ignacio Lunar Silva, Eric Cascales, Thierry Doan

Microbiology 169 (2023)10.1099/mic.0.001320

Analysis of the Brucella suis Twin Arginine Translocation System and Its Substrates Shows That It Is Essential for Viability

Elia Riquelme, Sabina Omarova, Bérengère Ize, David O’callaghan

Infection and Immunity 91 (2023)10.1128/iai.00459-22

Elucidating interprotein energy transfer dynamics within the antenna network from purple bacteria

Dihao Wang, Olivia Fiebig, Dvir Harris, Hila Toporik, Yi Ji, Chern Chuang, Muath Nairat, Ashley Tong, John Ogren, Stephanie Hart, Jianshu Cao, James Sturgis, Yuval Mazor, Gabriela Schlau-Cohen

Proceedings of the National Academy of Sciences of the United States of America 120:e2220477120 (2023)10.1073/pnas.2220477120

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